Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915524.1_cds_XP_016465307.1_58272
CDS Infomation

[gene=LOC107788166] [db_xref=GeneID:107788166] [protein=BRCA1-associated protein-like] [protein_id=XP_016465307.1] [location=join(61535..61836,61950..62058,62208..62322,63019..63116,63461..63567,63686..63935,64093..64146,64382..64525,64640..64704,65001..65055,65155..65307)] [gbkey=CDS]
Sequence

ATGTTCACCCTCCAAATCCACACCGTCGACTTTCCACAACCTCTTCCGACCACCGTCGCC
ACCACTTCCTCCGCCGCACACAGCCCAAACCCTAACACTAACCTCAGCAGCCTAAGCCTA
TCAGAACTTAGAGGGATCGCCCATCTGTTCCGCCACCTTCCCTCTGCCACCACTATCGCT
AACCCAATTGCCCGCACCACCACCGTTTTCATTGTTGCTGTCCCAAATTACCTCTCCCCT
GATGATTTCCTCCTTTTTTGTGGGACCCATATTGCTGACTTCTCTCATGTCCTCTTCCTC
AAGAATGATGGAATAGAACATAGTTACAGTGTGTTGATCAATCTTGTTAATCAATTGGCT
GCTGATGGGTTTTACTGTAGCTTCAATGGCAAAAGGTTTAGGCCTACTGAGGCTGAGATT
TGCCATGTTTACTTTATTCAATCAGTGGAATATGCAGAGTCAGCACATATTGCTAGTACG
CCTCCTGCTGGTTATACTGAATTGCCAACGTGTCCAGTGTGCCTTGAAAGGTTGGACCAA
GATACAAGCGGAATACAGAGTACACTATGTGATCATTCATTTCAGTGCTCTTGTGTCTCA
AAGTGGACCTATTTGGCATGCCAAGTCTGCCGACTTTGTCAGCAGCAAGATGAGAGACCT
ACCTGTTCAGAGTGTGGAACGTTGAAGAATCTTTGCGTTTGTCTGATTTGTGGTTTTGTA
GGGTGTGGAAGGTATGAGAAAAGGCATGCTATAAAACATTGGAGTGATGTAGCGCATCAC
TATTCACTTGAATTGGAAACCCAACAAATCTGGGACTATGTAGGCGACAAGTATGTCCAC
CGCTTGAATCAATCGAAAGGTGATGGAAAGTTGGTTACTGTGAATTCGCGTTGTACAGCA
GTTGATGGAGAATGTACAACTTGTGGCTATGATGAGGATTCAAGTTTTAGTGGTGCTCTT
TTCACCAGCAAAGTTGATTCGATTGTTGACGAGTACAACAATCTTCTTGCTAGTCAGCTG
GAGGCTCAAAGACAACATTATGAATCTCTACTAGCGGAGGCAAAAAGTGGAAAGGAGAGT
TCAATATCCAGGGCGGTGGAGAAGGCAGTTTTCTCTAAGATGAATGACATGCAAGCTAAG
ATAGAAATGTATACAGAGGAGACGAAGTCTGTTGCAGAGAGGAATCAAGTGCTTCTGAAA
AACCAACAGCTTTTGCAGACCAAGTGTAAAGAAACTGAAGAAAGGGAAAAGTTATCGCTC
AAGTCGAAGGACGAGAAAATACTGGATCTCAAGGAACAGATACGGGACTTGAAAGTTTAT
GTTGAAGCTCAGAGAAAACTTTCAAACATGGGAATTTCAGATGGGAAGGGAGGGTCAGTT
CTCTCTGTAGAATCCAACCAATCTTCCAGCAATTCTCGAAGGCGATCAAAGCTAGGTCGA
AGAAGGAACTAG

Peptide Sequence

PEP ID

XP_016465307.1
PEP Infomation

PREDICTED: BRCA1-associated protein-like [Nicotiana tabacum]
Sequence

MFTLQIHTVDFPQPLPTTVATTSSAAHSPNPNTNLSSLSLSELRGIAHLFRHLPSATTIA
NPIARTTTVFIVAVPNYLSPDDFLLFCGTHIADFSHVLFLKNDGIEHSYSVLINLVNQLA
ADGFYCSFNGKRFRPTEAEICHVYFIQSVEYAESAHIASTPPAGYTELPTCPVCLERLDQ
DTSGIQSTLCDHSFQCSCVSKWTYLACQVCRLCQQQDERPTCSECGTLKNLCVCLICGFV
GCGRYEKRHAIKHWSDVAHHYSLELETQQIWDYVGDKYVHRLNQSKGDGKLVTVNSRCTA
VDGECTTCGYDEDSSFSGALFTSKVDSIVDEYNNLLASQLEAQRQHYESLLAEAKSGKES
SISRAVEKAVFSKMNDMQAKIEMYTEETKSVAERNQVLLKNQQLLQTKCKETEEREKLSL
KSKDEKILDLKEQIRDLKVYVEAQRKLSNMGISDGKGGSVLSVESNQSSSNSRRRSKLGR
RRN

Transcript Sequence

Gene sequence data has not been registered.